Browse of TCMCG016C16220 protein

CDS

Accession Number	TCMCG016C16220
gbkey	CDS
Protein Id	OMO73573.1
Location	join(46212..46379,46471..46527,46617..46711,46966..47116,47244..47369,47515..47671,47762..47822,47906..48164,48651..48776,49393..49554,49658..49907,50055..50531,53785..55037,56687..57046)
Organism	Corchorus capsularis
locus_tag	CCACVL1_17220

Protein

Length	1233aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01011194.1
Definition	Protein phosphatase 2A, regulatory B subunit, B56 [Corchorus capsularis]
Locus_tag	CCACVL1_17220

EGGNOG-MAPPER Annotation

COG_category	S
Description	HAUS augmin-like complex subunit 6 N-terminus
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000226        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005819        [VIEW IN EMBL-EBI] GO:0005856        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007017        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008017        [VIEW IN EMBL-EBI] GO:0008092        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009524        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009555        [VIEW IN EMBL-EBI] GO:0009561        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0015630        [VIEW IN EMBL-EBI] GO:0015631        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044430        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0051011        [VIEW IN EMBL-EBI] GO:0055046        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTACACGAATTGCTTGCTTTTAGGTTTGGATCCGTCGATTATCGGACTCGGAGCTTCCAACGGAACCCCTCGGGTTGGACTATTCCGTCATTCCAACCCTAAATTAGGCGAACAACTTCTTTACTTCATCCTCTCTTCTCTTCGTGGCCCTGCTCAATCCGCTAGAGATTTCGATAGAGTTTGGCCGATTTTTGACTCTGCTCAATCTCGTGATTTCCGAAAGGTTGTTCAAGGGATAATCAGCGAGCTGGAAGCACAAGGAGCTCTACCACGGAGTAATTCAAGGGTTTCTTCGCTTGCTACTTGCTGCGGACCAAGATTTGTTGAACTTTTATGGCAACTTTCATTGCATGCGTTGAGAGAGGTTCATAGACGGACTTTTGCAGCAGATGTTGCTTCTAACCCGTTGCCTGCACCATTGACTGATGTTGCATTTTCACATGCAGCCACTTTACTTCCGGTGACAAAGGCTAGAATAGCACTTGAGCGGAGGCGATTTCTAAAAAATGCAGAAACAGCAGTTCAAAGACAGGCTATGTGGTCAAATTTGGCTCATGAAATGACTGCAGAGTTTCGTGGTCTTTGTGCAGAAGAGGCTTATTTGCAGCAAGAGCTGGAAAAACTGCATGATTTGAGGAACAAAGTGAAGTTGGAAGGGGAGCTGTGGGATGATCTTGTCTCTACCTCCAGCCAGAATTCACATTTGGTTTCAAAGGCCACTCGCTTATGGGAGTCAATATTAGCTCGCAAAAGTCAGCATGAAGTTCTTGCTTCAGGCCCCATTGAGGATTTGATAGCTCATCGGGAGCATAGGTACCGCATTTCTGGGTCGTCTCTGCTTGCAGCTATGGATCAGAGTTCTCAGGTTCCTTATTCTGACGTCTTATCCGCTCAGTCTGGTGATTTGGATGACAACGAAGGGAATGATGGATATCACGCACGGGTGAATGATGAGACACTTTCTCGGGTAGATGATAGGAGTGGAAGAGTCCAGCAGACCGTGGATGTAGCTGAGATTATTAGACGTTGGACACATGCATTACAACGGATTCATAAACAGTCATTACAGCTGGCAAAGGCAAATGATGGAGAGGGTCCAGATATATTACGAAGTGGACATGATGGTGGCACAAGTGGCCATGCTGAGTCATTAGCGACAACTCTTGCTGAGCATCAGCAACACCTGGCTAGCTTTCAGGTGCTTATTAACCAACTTAAGGAAGTTGCTCCGTCAATTCAGAAGTCAATATCAGATTGTACAGAGAAAGTAAATAGCATTTCGTCCAACTTGCCTTCCATGGCCAAACATCGTGGTCAAGCCACCTCACCAATGCCAGCTCAGAGCAGTGGAAGGACCTTGGAAAGTAGCTCTGATGATGTCGGTGACATTACTTCAAAAATGTCTACTGTTCAGCTTGACAAAGTTTCAGCTAGTCCTGCTTTAAAGCTCCCACAGTTATTTAGTTTAACCCCAAATTCATCTGGAAAGGGTGGAAACATGCACAAGCGCCATACTTTAGTTCCTCAGACCAACCAAATGGAAACTTTGTCTGAAAGGAGTTCTGTGGACCAGCCTCTATCAAACAATCGCCTAGATAACACACCCCAAGATAGTGACAGTTCTTATGTTCAGAACCTAAAGAGATCTGTGCGGCAAGCTGCGCTGTCAACGCCATCCTGCAATTCAGACTCATCACGAGATAGTCAGTCCGATGAAAGTTCTGAACACTTCTTTGTACCTGTTTCAACAACTAATTTTCCTCGAGGAGGACCAGAAAATAAAGTGGGCTCATTAAGGAGTAAGAGATTATTTTCAACTCAAACGGACAATTCCTTGCTTGACAGCAATACTAGTGATGGTCATATCGAGAGTAACTATGACGACTTGCCCAACATGTTGAACAACCTGGATTCTCTTAATGATTTTGATCAAGTAAATGGATTTCTCTCAGCCGCTGGTTCAAGTTTTGCAGCTTCTGATGGGCAAAGGTCATTTTTTGACATGGAAGAAGTACAGGATCAGGTTTTCTCCCCTCCTTTGCTGATGGACACATCCCTGTTAACCGATTCTTATGAGGATTTGCTCGTGCATGAGAAGAGGTTCTCCATTCAAGTTAAGATGATCAAACAAATACTTAATAGGCTCCCACGGAAACCATCCAAGTCAAGTGAGAATCGTGAGGGAGGAGGAGGAACCTCTACCTCTTCTTCAAATGCTTCTACAAATTCTAGAAACAGTGATCCAGCTGGTAACCGCTATGCAAACTCAAGCGGTGCATCCTTTTCTGGATTTAATTCGACTCCAAGTTTAGGATTGAATCAAGGCAATAAGTTTGCTCAAGTTGTTAATGCAAAGCTGAATGGGAATATGGTTGCTTCTTCTTTTGAGGCATTGCCTAGTTTTAGAGATGTTCCAAATTCCGAGAAGCAGAACTTGTTTATCAGAAAACTGAACTTGTGTTGTATTGTGTTCGACTTCACTGACCCAACCAAAAACCTGAAAGAGAAGGATTTGAAGAGGCAAACTTTGCTAGAGCTTGTGGATTATATTTCATCTTCCACTGGGAAATTCTCAGAGATTGTTATGCAAGAAATTGTAAAGATGGTGTCTGCAAATTTGTTTAGAGCACTTACTTCTCCGCCCCGTGAGAACAAAGTTTTAGAAGCTTTTGATTTGGAAGATGACGAGCCCTCAATGGACCCTGCATGGCCTCACTTGCAAGTTGTTTATGAATTTCTCTTGAGGTTCGTGGCATCACCTGAGACAGATGCAAAAATAGCGAAGCGGTATATTGACCACTCTTTTGTTCTAAGGTTGTTAGATCTTTTTGATTCAGAGGACCCCAGAGAAAGAGAGTATCTAAAAACTGTTCTTCATCGCATCTACGGAAAATTTATGGTCCATCGTCCATACATCAGGAAAGCAATCAACAACATCTTTTACCGTTTTATTTTTGAAACTGAAAAGCACAATGGAATTGCGGAGCTATTAGAGATTTTGGGAAGTATAATCAATGGGTTTGCTTTGCCCCTGAAGGAAGAACATAAGCTCTTTCTTGTTCGGGCATTGATACCGCTTCACAAACCAAAGTGCATACCCATGTACCACCAGCAGCTATCTTACTGCATTACTCAATTTGTGGAGAAAGACTGCAAGCTTGCTGATACTGTTATAAGAGGCTTGCTAAAGTATTGGCCAATTACAAATAGCTCAAAAGAAGTCATGTTCTTGGGTGAACTCGAGGAAGTTTTAGAGGCCACACAACCTGCTGAATTTCAACGCTGCATGGTACCCTTATTCCGTCAGATAGGCCGTTGCTTGAGTAGTTCACATTTTCAGGTGGCAGAGAGGGCATTGTTCTTGTGGAACAATGATCATATTGAGAACCTAATAAAACAGAATCGGAAAGTTATACTTCCAATTATCTTCCCTTCCTTGGAAAGGAATGCAAGAAACCACTGGAATCAGGCAGTGCAGAGCTTGACCCTAAATGTCCGCAAGATTTTCTCCGACAGTGACCCTGAGCTCTTTGAGGAGTGCTTGCAAAAGTTTCAGGAAGATGAAGCACGAGAAAATGAGGTTAAATCAAAACGTGAAGCCACATGGAAACGATTAGAAGAGATTGCTGCAATGAAAGCGGCAAGTAATGAACCCGTGCTTGTCTCCCCAAAAATAACTACTCGCAAGTCATCTGGATAG

Protein:   MYTNCLLLGLDPSIIGLGASNGTPRVGLFRHSNPKLGEQLLYFILSSLRGPAQSARDFDRVWPIFDSAQSRDFRKVVQGIISELEAQGALPRSNSRVSSLATCCGPRFVELLWQLSLHALREVHRRTFAADVASNPLPAPLTDVAFSHAATLLPVTKARIALERRRFLKNAETAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKVKLEGELWDDLVSTSSQNSHLVSKATRLWESILARKSQHEVLASGPIEDLIAHREHRYRISGSSLLAAMDQSSQVPYSDVLSAQSGDLDDNEGNDGYHARVNDETLSRVDDRSGRVQQTVDVAEIIRRWTHALQRIHKQSLQLAKANDGEGPDILRSGHDGGTSGHAESLATTLAEHQQHLASFQVLINQLKEVAPSIQKSISDCTEKVNSISSNLPSMAKHRGQATSPMPAQSSGRTLESSSDDVGDITSKMSTVQLDKVSASPALKLPQLFSLTPNSSGKGGNMHKRHTLVPQTNQMETLSERSSVDQPLSNNRLDNTPQDSDSSYVQNLKRSVRQAALSTPSCNSDSSRDSQSDESSEHFFVPVSTTNFPRGGPENKVGSLRSKRLFSTQTDNSLLDSNTSDGHIESNYDDLPNMLNNLDSLNDFDQVNGFLSAAGSSFAASDGQRSFFDMEEVQDQVFSPPLLMDTSLLTDSYEDLLVHEKRFSIQVKMIKQILNRLPRKPSKSSENREGGGGTSTSSSNASTNSRNSDPAGNRYANSSGASFSGFNSTPSLGLNQGNKFAQVVNAKLNGNMVASSFEALPSFRDVPNSEKQNLFIRKLNLCCIVFDFTDPTKNLKEKDLKRQTLLELVDYISSSTGKFSEIVMQEIVKMVSANLFRALTSPPRENKVLEAFDLEDDEPSMDPAWPHLQVVYEFLLRFVASPETDAKIAKRYIDHSFVLRLLDLFDSEDPREREYLKTVLHRIYGKFMVHRPYIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITNSSKEVMFLGELEEVLEATQPAEFQRCMVPLFRQIGRCLSSSHFQVAERALFLWNNDHIENLIKQNRKVILPIIFPSLERNARNHWNQAVQSLTLNVRKIFSDSDPELFEECLQKFQEDEARENEVKSKREATWKRLEEIAAMKAASNEPVLVSPKITTRKSSG